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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs58488649 chr18:33221896 G/A 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs58515225 chr18:33206234 T/C 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs58640499 chr1:6350585 C/T 8.21E-11 504 37.47 37.77 2.3 KM Plot
KIRC rs58875887 chr9:92165437 C/T 2.23E-5 507 36.88 48.2 10.62 KM Plot
KIRC rs58991229 chr11:71839878 G/A 0.000128 504 36.57 44.58 10.97 KM Plot
KIRC rs59062684 chr4:107887480 GT/G 5.55E-11 503 37.73 36.58 5.53 KM Plot
KIRC rs59115636 chr11:34794686 A/G 9.4E-8 504 37.5 32.23 3.3 KM Plot
KIRC rs592017 chr3:124360523 G/A 4.85E-5 505 37.03 40.05 16.92 KM Plot
KIRC rs59207796 chr2:191434570 CACATG/C 8.06E-5 502 38.88 32.6 38.32 KM Plot
KIRC rs59238367 chr11:117920100 G/A 8.11E-6 499 37.73 31.73 24.92 KM Plot
KIRC rs59252764 chr10:33052938 A/G 3.33E-6 506 37.37 37.63 7.33 KM Plot
KIRC rs6011967 chr20:45095161 T/C 3.03E-5 505 39.03 31.07 4.75 KM Plot
KIRC rs6011968 chr20:45098868 G/A 3.39E-11 504 37.83 35.43 2.17 KM Plot
KIRC rs6011972 chr20:45111826 G/A 8.64E-14 508 37.67 35.43 2.17 KM Plot
KIRC rs60138626 chr1:6363163 G/T 9.13E-11 503 37.47 39.7 2.3 KM Plot